Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.6□□□□□ -0.55
ApoeP08226 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.6□□□□□ -0.55
ApoeP08226 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.6□□□□□ -0.55
ApoeP08226 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Gm23119-201ENSMUST00000158610 140 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.6□□□□□ -0.55
ApoeP08226 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Gm44855-201ENSMUST00000205725 362 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Gm44872-201ENSMUST00000207864 420 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
ApoeP08226 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.6□□□□□ -0.55
ApoeP08226 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.6□□□□□ -0.55
ApoeP08226 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ApoeP08226 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
ApoeP08226 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ApoeP08226 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.59□□□□□ -0.55
ApoeP08226 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ApoeP08226 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Mir7023-201ENSMUST00000185093 64 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.59□□□□□ -0.55
ApoeP08226 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.59□□□□□ -0.55
ApoeP08226 Gm4768-201ENSMUST00000206199 686 ntBASIC11.59□□□□□ -0.55
ApoeP08226 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Gm5867-201ENSMUST00000063197 592 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.59□□□□□ -0.55
ApoeP08226 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ApoeP08226 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
ApoeP08226 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ApoeP08226 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms