Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm6013-201ENSMUST00000212264 699 ntBASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm18935-201ENSMUST00000212692 664 ntBASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm8712-201ENSMUST00000221090 701 ntBASIC10.58□□□□□ -0.72
Igh-VJ558P01758 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm10478-201ENSMUST00000084451 396 ntBASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igh-VJ558P01758 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm27501-201ENSMUST00000183599 107 ntBASIC10.57□□□□□ -0.72
Igh-VJ558P01758 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.57□□□□□ -0.72
Igh-VJ558P01758 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.57□□□□□ -0.72
Igh-VJ558P01758 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Igh-VJ558P01758 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms