Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm23694-201ENSMUST00000179335 110 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm27390-201ENSMUST00000184516 176 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm4294-201ENSMUST00000105169 614 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm15549-201ENSMUST00000121595 622 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm25492-201ENSMUST00000157383 129 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scn7aB1AYL1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm12628-201ENSMUST00000122193 382 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm43912-201ENSMUST00000204352 538 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.42■□□□□ 0.06
Scn7aB1AYL1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm25063-201ENSMUST00000104666 94 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm26047-201ENSMUST00000157308 113 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm26047-202ENSMUST00000198840 115 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 CT009527.1-201ENSMUST00000224205 339 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms