Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm25053-201ENSMUST00000103982 133 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm25922-201ENSMUST00000104281 130 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm12791-201ENSMUST00000120788 655 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm24679-201ENSMUST00000158762 111 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm17192-201ENSMUST00000169031 511 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm6114-201ENSMUST00000182472 968 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Mir8093-201ENSMUST00000185043 137 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm25053-202ENSMUST00000199731 132 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a6B1AVK5 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Mir671-201ENSMUST00000102432 98 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm20495-201ENSMUST00000173902 235 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm21778-201ENSMUST00000178779 471 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms