Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb2S4R1M3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb2S4R1M3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb2S4R1M3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.26□□□□□ -0.45
H2afb2S4R1M3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb2S4R1M3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms