Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm21811-201ENSMUST00000096485 930 ntBASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcb1Q9Z0H3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcb1Q9Z0H3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms