Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm18056-201ENSMUST00000207670 568 ntBASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm18061-201ENSMUST00000208350 562 ntBASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm18063-201ENSMUST00000208529 568 ntBASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm18052-201ENSMUST00000208750 559 ntBASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.16□□□□□ -0.62
Clcf1Q9QZM3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Gm11930-201ENSMUST00000117788 190 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Gm15703-201ENSMUST00000120250 880 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms