Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm15240-201ENSMUST00000118156 720 ntBASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm7774-201ENSMUST00000200064 533 ntBASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm10253-201ENSMUST00000194270 940 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm8227-201ENSMUST00000223306 571 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trem1Q9JKE2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms