Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sf3a3Q9D554 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm12291-201ENSMUST00000121627 311 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm27430-201ENSMUST00000184585 107 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm44333-201ENSMUST00000197168 107 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3a3Q9D554 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm27397-201ENSMUST00000184997 107 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm42599-201ENSMUST00000201308 469 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm9797-201ENSMUST00000052902 613 ntBASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.38□□□□□ -0.43
Sf3a3Q9D554 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms