Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm23596-201ENSMUST00000104304 132 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12616-201ENSMUST00000118594 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm25881-201ENSMUST00000157783 103 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm9550-201ENSMUST00000161130 862 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12624-201ENSMUST00000177615 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12621-201ENSMUST00000177760 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12615-201ENSMUST00000177970 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12622-201ENSMUST00000177975 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12627-201ENSMUST00000178412 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12625-201ENSMUST00000179122 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12614-201ENSMUST00000179586 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm12613-201ENSMUST00000180323 382 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm13045-201ENSMUST00000119019 712 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm9630-201ENSMUST00000178304 885 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm19353-201ENSMUST00000184561 445 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm29787-201ENSMUST00000222129 849 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm26448-201ENSMUST00000082446 203 ntBASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Stag1Q9D3E6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms