Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm16479-201ENSMUST00000121706 932 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm2231-201ENSMUST00000125661 612 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm17150-201ENSMUST00000165577 381 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.55□□□□□ -0.56
Ddx28Q9CWT6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ddx28Q9CWT6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms