Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm13392-201ENSMUST00000117708 150 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.03□□□□□ -0.48
Trim16Q99PP9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.03□□□□□ -0.48
Trim16Q99PP9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.03□□□□□ -0.48
Trim16Q99PP9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.03□□□□□ -0.48
Trim16Q99PP9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim16Q99PP9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim16Q99PP9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.02□□□□□ -0.48
Trim16Q99PP9 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.02□□□□□ -0.49
Trim16Q99PP9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim16Q99PP9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms