Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim8Q99PJ2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm11637-201ENSMUST00000120601 592 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm8652-201ENSMUST00000181363 964 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms