Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.38□□□□□ -0.43
Cdk9Q99J95 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.38□□□□□ -0.43
Cdk9Q99J95 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cdk9Q99J95 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm27701-201ENSMUST00000184498 110 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk9Q99J95 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Gm11478-201ENSMUST00000117851 599 ntBASIC12.36□□□□□ -0.43
Cdk9Q99J95 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Gm6152-201ENSMUST00000151704 340 ntBASIC12.36□□□□□ -0.43
Cdk9Q99J95 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms