Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm27701-201ENSMUST00000184498 110 ntBASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm7287-201ENSMUST00000205267 602 ntBASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm19163-201ENSMUST00000223313 780 ntBASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Thumpd1Q99J36 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm15920-201ENSMUST00000118998 402 ntBASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm23119-201ENSMUST00000158610 140 ntBASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm32025-201ENSMUST00000217960 307 ntBASIC10.93□□□□□ -0.66
Thumpd1Q99J36 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thumpd1Q99J36 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gm18304-201ENSMUST00000189162 546 ntBASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.92□□□□□ -0.66
Thumpd1Q99J36 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms