Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhga4Q91XY4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm13316-201ENSMUST00000140537 691 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm16296-201ENSMUST00000159905 325 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm6621-201ENSMUST00000193251 772 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga4Q91XY4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms