Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim29Q8R2Q0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm29396-201ENSMUST00000185659 716 ntBASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm38158-201ENSMUST00000194617 339 ntBASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm6013-201ENSMUST00000212264 699 ntBASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim29Q8R2Q0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm43118-201ENSMUST00000199149 775 ntBASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm10608-202ENSMUST00000213924 676 ntBASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm7046-201ENSMUST00000221351 977 ntBASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim29Q8R2Q0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms