Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clrn1Q8K445 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clrn1Q8K445 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
Clrn1Q8K445 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm42937-201ENSMUST00000197360 752 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm44882-201ENSMUST00000205702 802 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.58□□□□□ -0.56
Clrn1Q8K445 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn1Q8K445 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm25214-201ENSMUST00000104573 129 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm28882-201ENSMUST00000185504 314 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm30285-201ENSMUST00000214614 422 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms