Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm23912-201ENSMUST00000104687 87 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ShfQ8CG80 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm3890-201ENSMUST00000182416 207 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm42693-201ENSMUST00000196779 631 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm7809-201ENSMUST00000153199 742 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm24548-201ENSMUST00000158650 108 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ShfQ8CG80 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.93□□□□□ -0.66
ShfQ8CG80 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ShfQ8CG80 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.93□□□□□ -0.66
ShfQ8CG80 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ShfQ8CG80 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms