Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm22323-201ENSMUST00000103832 109 ntBASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm37259-201ENSMUST00000193903 849 ntBASIC14.8□□□□□ -0.04
Brf1Q8CFK2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.8□□□□□ -0.04
Brf1Q8CFK2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gm13350-201ENSMUST00000120519 479 ntBASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gm14381-201ENSMUST00000122105 414 ntBASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf1Q8CFK2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Rprl1-201ENSMUST00000158050 327 ntBASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf1Q8CFK2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms