Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm12380-201ENSMUST00000119012 544 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm27627-201ENSMUST00000183644 150 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx1Q8C8B0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.27□□□□□ -0.12
Alx1Q8C8B0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx1Q8C8B0 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.27□□□□□ -0.12
Alx1Q8C8B0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm11439-201ENSMUST00000118598 409 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Mir433-201ENSMUST00000093564 124 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx1Q8C8B0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Alx1Q8C8B0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Alx1Q8C8B0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Alx1Q8C8B0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms