Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Mir1247-201ENSMUST00000116706 82 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm11793-201ENSMUST00000120433 981 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm7809-201ENSMUST00000153199 742 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm9630-201ENSMUST00000178304 885 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm6222-202ENSMUST00000182143 629 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm9823-201ENSMUST00000051212 327 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh20Q8BIZ0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm15198-201ENSMUST00000117283 177 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm14704-201ENSMUST00000120300 874 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm3890-201ENSMUST00000182416 207 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh20Q8BIZ0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms