Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm5187-201ENSMUST00000117317 991 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm15824-201ENSMUST00000119516 955 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm14999-201ENSMUST00000121039 624 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm4034-201ENSMUST00000187674 480 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm12058-201ENSMUST00000118614 437 ntBASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.04□□□□□ -0.48
Ccdc116Q80X53 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Snora78-201ENSMUST00000158630 128 ntBASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm5370-201ENSMUST00000187187 574 ntBASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Gm19309-201ENSMUST00000218295 205 ntBASIC12.04□□□□□ -0.48
Ccdc116Q80X53 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc116Q80X53 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms