Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm6098-201ENSMUST00000180234 330 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm45598-202ENSMUST00000210719 986 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm10764-202ENSMUST00000220397 2335 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm11597-201ENSMUST00000121423 964 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm29615-201ENSMUST00000185371 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28224-201ENSMUST00000186078 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm29001-201ENSMUST00000186177 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28292-201ENSMUST00000186593 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28101-201ENSMUST00000187608 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm29076-201ENSMUST00000187689 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28302-201ENSMUST00000187931 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28646-201ENSMUST00000188220 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28205-201ENSMUST00000189177 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm29032-201ENSMUST00000189797 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm28695-201ENSMUST00000190300 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm37448-201ENSMUST00000192795 697 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm38014-201ENSMUST00000193349 2612 ntBASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pif1Q80SX8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gm29787-201ENSMUST00000222129 849 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms