Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm13226-201ENSMUST00000117838 404 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm11425-201ENSMUST00000119608 498 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm23363-201ENSMUST00000175024 79 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm9396-201ENSMUST00000076703 567 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.4□□□□□ -0.26
Ctdp1Q7TSG2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.4□□□□□ -0.27
Ctdp1Q7TSG2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ctdp1Q7TSG2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ctdp1Q7TSG2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gm43818-201ENSMUST00000200605 466 ntBASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ctdp1Q7TSG2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ctdp1Q7TSG2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.38□□□□□ -0.27
Ctdp1Q7TSG2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ctdp1Q7TSG2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ctdp1Q7TSG2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms