Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm12314-201ENSMUST00000118104 538 ntBASIC12.46□□□□□ -0.41
Casc4Q6P2L7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Casc4Q6P2L7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Casc4Q6P2L7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Mir6420-201ENSMUST00000185032 102 ntBASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Casc4Q6P2L7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.44□□□□□ -0.42
Casc4Q6P2L7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms