Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm25053-201ENSMUST00000103982 133 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm25922-201ENSMUST00000104281 130 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm13117-201ENSMUST00000120894 691 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm24248-201ENSMUST00000157321 322 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm24679-201ENSMUST00000158762 111 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm9135-201ENSMUST00000182963 990 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm42816-201ENSMUST00000198433 325 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm25053-202ENSMUST00000199731 132 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm39288-201ENSMUST00000210554 446 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm30671-201ENSMUST00000214898 318 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Gm6655-201ENSMUST00000201932 1309 ntBASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm11783-201ENSMUST00000119549 885 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm38094-201ENSMUST00000195864 2978 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm7940-201ENSMUST00000218195 769 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm45779-201ENSMUST00000212189 4064 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm12791-201ENSMUST00000120788 655 ntBASIC18.55■□□□□ 0.56
Slx4Q6P1D7 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slx4Q6P1D7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm21759-201ENSMUST00000178345 1828 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm12943-201ENSMUST00000119616 210 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm11502-201ENSMUST00000120917 1211 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm11244-201ENSMUST00000121243 237 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm9089-201ENSMUST00000122027 526 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm42433-201ENSMUST00000196806 940 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm3433-201ENSMUST00000210149 1058 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm3318-201ENSMUST00000217604 1183 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms