Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm9823-201ENSMUST00000051212 327 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sp140Q6NSQ5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm13570-201ENSMUST00000140763 309 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm45880-201ENSMUST00000213041 853 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm19309-201ENSMUST00000218295 205 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.46□□□□□ -0.41
Sp140Q6NSQ5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sp140Q6NSQ5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Mir1247-201ENSMUST00000116706 82 ntBASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm27023-201ENSMUST00000182372 285 ntBASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm2546-201ENSMUST00000182630 991 ntBASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Gm25857-201ENSMUST00000082788 129 ntBASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms