Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm45880-201ENSMUST00000213041 853 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 CT025526.1-201ENSMUST00000217327 267 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 AC154527.3-201ENSMUST00000225519 989 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm44441-201ENSMUST00000203642 2475 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Mir1247-201ENSMUST00000116706 82 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm15198-201ENSMUST00000117283 177 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm11978-201ENSMUST00000122315 466 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm2231-201ENSMUST00000125661 612 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm42452-201ENSMUST00000199749 617 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm6458-201ENSMUST00000211573 635 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Foxc1Q61572 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.33□□□□□ -0.92
Foxc1Q61572 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 AL589696.1-201ENSMUST00000225711 330 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 AC133517.2-201ENSMUST00000226820 690 ntBASIC9.33□□□□□ -0.92
Foxc1Q61572 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm7399-201ENSMUST00000032395 858 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms