Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm5419-201ENSMUST00000119301 527 ntBASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Gm23119-201ENSMUST00000158610 140 ntBASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pkd1l3Q2EG98 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm43962-201ENSMUST00000203898 190 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm8285-201ENSMUST00000208293 759 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Gm29787-201ENSMUST00000222129 849 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pkd1l3Q2EG98 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm12196-201ENSMUST00000120954 262 ntBASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm17391-201ENSMUST00000171036 126 ntBASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm34767-201ENSMUST00000191813 1062 ntBASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm37246-201ENSMUST00000192665 835 ntBASIC11□□□□□ -0.65
Pkd1l3Q2EG98 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pkd1l3Q2EG98 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms