Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm9673-201ENSMUST00000119287 781 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm27826-201ENSMUST00000175282 255 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm5976-201ENSMUST00000180794 996 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.94□□□□□ -0.66
Chd8Q09XV5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd8Q09XV5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm37981-201ENSMUST00000194280 535 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm44216-201ENSMUST00000203942 157 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Rce1-203ENSMUST00000224707 1255 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Cog3-203ENSMUST00000227473 4197 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm25492-201ENSMUST00000157383 129 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd8Q09XV5 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.93□□□□□ -0.66
Chd8Q09XV5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms