Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Npas1P97459 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Gm37935-201ENSMUST00000192012 982 ntBASIC10.31□□□□□ -0.76
Npas1P97459 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.31□□□□□ -0.76
Npas1P97459 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.31□□□□□ -0.76
Npas1P97459 Gm6458-201ENSMUST00000211573 635 ntBASIC10.31□□□□□ -0.76
Npas1P97459 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.31□□□□□ -0.76
Npas1P97459 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.31□□□□□ -0.76
Npas1P97459 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.31□□□□□ -0.76
Npas1P97459 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Npas1P97459 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.31□□□□□ -0.76
Npas1P97459 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Npas1P97459 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Gm13813-201ENSMUST00000120998 787 ntBASIC10.3□□□□□ -0.76
Npas1P97459 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Npas1P97459 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.3□□□□□ -0.76
Npas1P97459 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.3□□□□□ -0.76
Npas1P97459 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.3□□□□□ -0.76
Npas1P97459 Gm42612-201ENSMUST00000197986 623 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Gm43170-201ENSMUST00000199827 612 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.3□□□□□ -0.76
Npas1P97459 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Npas1P97459 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms