Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lsm6P62313 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm13875-201ENSMUST00000120162 282 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm2546-201ENSMUST00000182630 991 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm42693-201ENSMUST00000196779 631 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Lsm6P62313 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.79□□□□□ -0.68
Lsm6P62313 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Lsm6P62313 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.79□□□□□ -0.68
Lsm6P62313 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm6P62313 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm6P62313 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm24934-201ENSMUST00000103764 111 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Gm23912-201ENSMUST00000104687 87 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms