Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smg6P61406 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.89■□□□□ 0.3
Smg6P61406 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Gm27046-201ENSMUST00000182160 463 ntBASIC16.89■□□□□ 0.29
Smg6P61406 Gm27023-201ENSMUST00000182372 285 ntBASIC16.89■□□□□ 0.29
Smg6P61406 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.89■□□□□ 0.29
Smg6P61406 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.89■□□□□ 0.29
Smg6P61406 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Smg6P61406 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.89■□□□□ 0.29
Smg6P61406 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smg6P61406 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smg6P61406 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Smg6P61406 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Gm12566-201ENSMUST00000121479 359 ntBASIC16.88■□□□□ 0.29
Smg6P61406 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.88■□□□□ 0.29
Smg6P61406 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Gm15276-201ENSMUST00000145953 498 ntBASIC16.88■□□□□ 0.29
Smg6P61406 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smg6P61406 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smg6P61406 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smg6P61406 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.88■□□□□ 0.29
Smg6P61406 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smg6P61406 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smg6P61406 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Smg6P61406 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.88■□□□□ 0.29
Smg6P61406 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smg6P61406 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Smg6P61406 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smg6P61406 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smg6P61406 Arhgef3-204ENSMUST00000225949 3198 ntBASIC16.87■□□□□ 0.29
Smg6P61406 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smg6P61406 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.87■□□□□ 0.29
Smg6P61406 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smg6P61406 Gm22334-201ENSMUST00000158070 133 ntBASIC16.87■□□□□ 0.29
Smg6P61406 Gm25732-201ENSMUST00000175168 60 ntBASIC16.87■□□□□ 0.29
Smg6P61406 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.87■□□□□ 0.29
Smg6P61406 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.87■□□□□ 0.29
Smg6P61406 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.87■□□□□ 0.29
Smg6P61406 Gm45224-201ENSMUST00000208203 414 ntBASIC16.87■□□□□ 0.29
Smg6P61406 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smg6P61406 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms