Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rmrp-201ENSMUST00000157463 271 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm17208-201ENSMUST00000168388 535 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm27331-201ENSMUST00000183705 60 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm27486-201ENSMUST00000184923 80 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm38671-201ENSMUST00000200573 130 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm43371-201ENSMUST00000202838 1031 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm7287-201ENSMUST00000205267 602 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.91□□□□□ -0.66
Sf3b6P59708 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.91□□□□□ -0.66
Sf3b6P59708 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Sf3b6P59708 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sf3b6P59708 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Gm27243-201ENSMUST00000183964 521 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Gm8463-201ENSMUST00000208573 613 ntBASIC10.9□□□□□ -0.66
Sf3b6P59708 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.9□□□□□ -0.66
Sf3b6P59708 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sf3b6P59708 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sf3b6P59708 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sf3b6P59708 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm11637-201ENSMUST00000120601 592 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.89□□□□□ -0.67
Sf3b6P59708 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms