Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp5P56399 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp5P56399 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp5P56399 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp5P56399 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp5P56399 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp5P56399 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Usp5P56399 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.32□□□□□ -0.12
Usp5P56399 Gm2260-201ENSMUST00000184965 657 ntBASIC14.32□□□□□ -0.12
Usp5P56399 Gm9230-201ENSMUST00000188228 532 ntBASIC14.32□□□□□ -0.12
Usp5P56399 Gm19187-201ENSMUST00000206781 892 ntBASIC14.32□□□□□ -0.12
Usp5P56399 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp5P56399 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp5P56399 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp5P56399 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp5P56399 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp5P56399 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp5P56399 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp5P56399 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp5P56399 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.31□□□□□ -0.12
Usp5P56399 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp5P56399 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp5P56399 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp5P56399 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp5P56399 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp5P56399 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.31□□□□□ -0.12
Usp5P56399 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp5P56399 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.3□□□□□ -0.12
Usp5P56399 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.3□□□□□ -0.12
Usp5P56399 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp5P56399 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Usp5P56399 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Usp5P56399 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp5P56399 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp5P56399 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp5P56399 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.3□□□□□ -0.12
Usp5P56399 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms