Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rrp1P56183 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.84□□□□□ -0.19
Rrp1P56183 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.84□□□□□ -0.19
Rrp1P56183 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.84□□□□□ -0.19
Rrp1P56183 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm44958-201ENSMUST00000203734 736 ntBASIC13.84□□□□□ -0.19
Rrp1P56183 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.84□□□□□ -0.19
Rrp1P56183 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Gm25857-201ENSMUST00000082788 129 ntBASIC13.84□□□□□ -0.19
Rrp1P56183 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rrp1P56183 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.84□□□□□ -0.19
Rrp1P56183 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rrp1P56183 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rrp1P56183 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rrp1P56183 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rrp1P56183 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.83□□□□□ -0.2
Rrp1P56183 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.83□□□□□ -0.2
Rrp1P56183 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Gm27847-201ENSMUST00000183711 107 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Gm27375-201ENSMUST00000183799 107 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.83□□□□□ -0.2
Rrp1P56183 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rrp1P56183 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.83□□□□□ -0.2
Rrp1P56183 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.83□□□□□ -0.2
Rrp1P56183 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.83□□□□□ -0.2
Rrp1P56183 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rrp1P56183 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rrp1P56183 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms