Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Msh6P54276 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Msh6P54276 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Msh6P54276 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.49■□□□□ 0.07
Msh6P54276 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.49■□□□□ 0.07
Msh6P54276 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.49■□□□□ 0.07
Msh6P54276 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm23153-201ENSMUST00000175323 313 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Mir7076-201ENSMUST00000183519 74 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gm29155-201ENSMUST00000185910 269 ntBASIC15.49■□□□□ 0.07
Msh6P54276 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gm4607-201ENSMUST00000206649 577 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.49■□□□□ 0.07
Msh6P54276 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.49■□□□□ 0.07
Msh6P54276 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh6P54276 Gm10288-201ENSMUST00000084614 537 ntBASIC15.49■□□□□ 0.07
Msh6P54276 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.48■□□□□ 0.07
Msh6P54276 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Gm22144-201ENSMUST00000157402 102 ntBASIC15.48■□□□□ 0.07
Msh6P54276 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.48■□□□□ 0.07
Msh6P54276 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Msh6P54276 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Msh6P54276 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.47■□□□□ 0.07
Msh6P54276 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Msh6P54276 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.47■□□□□ 0.07
Msh6P54276 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.47■□□□□ 0.07
Msh6P54276 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Gm5419-201ENSMUST00000119301 527 ntBASIC15.47■□□□□ 0.07
Msh6P54276 Gm12899-201ENSMUST00000120565 551 ntBASIC15.47■□□□□ 0.07
Msh6P54276 Gm11246-201ENSMUST00000120880 345 ntBASIC15.47■□□□□ 0.07
Msh6P54276 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.47■□□□□ 0.07
Msh6P54276 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.47■□□□□ 0.07
Msh6P54276 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Msh6P54276 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Msh6P54276 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.47■□□□□ 0.07
Msh6P54276 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Msh6P54276 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Msh6P54276 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Msh6P54276 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Msh6P54276 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Msh6P54276 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms