Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm9139-201ENSMUST00000218817 700 ntBASIC18.59■□□□□ 0.57
Cux1P53564 AC154257.1-202ENSMUST00000224729 843 ntBASIC18.59■□□□□ 0.57
Cux1P53564 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux1P53564 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cux1P53564 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cux1P53564 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC18.59■□□□□ 0.57
Cux1P53564 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cux1P53564 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cux1P53564 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux1P53564 Gm37859-201ENSMUST00000195529 2173 ntBASIC18.58■□□□□ 0.57
Cux1P53564 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cux1P53564 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cux1P53564 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cux1P53564 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cux1P53564 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cux1P53564 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cux1P53564 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cux1P53564 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Cux1P53564 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cux1P53564 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Gm25766-201ENSMUST00000104101 131 ntBASIC18.58■□□□□ 0.56
Cux1P53564 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC18.58■□□□□ 0.56
Cux1P53564 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC18.58■□□□□ 0.56
Cux1P53564 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC18.58■□□□□ 0.56
Cux1P53564 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC18.58■□□□□ 0.56
Cux1P53564 AC124457.1-201ENSMUST00000198845 120 ntBASIC18.58■□□□□ 0.56
Cux1P53564 Gm8574-201ENSMUST00000203207 924 ntBASIC18.58■□□□□ 0.56
Cux1P53564 Gm6108-201ENSMUST00000208365 367 ntBASIC18.58■□□□□ 0.56
Cux1P53564 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC18.58■□□□□ 0.56
Cux1P53564 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cux1P53564 n-R5s211-201ENSMUST00000093689 119 ntBASIC18.58■□□□□ 0.56
Cux1P53564 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux1P53564 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cux1P53564 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.58■□□□□ 0.56
Cux1P53564 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.57■□□□□ 0.56
Cux1P53564 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.57■□□□□ 0.56
Cux1P53564 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC18.57■□□□□ 0.56
Cux1P53564 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
Cux1P53564 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC18.57■□□□□ 0.56
Cux1P53564 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC18.57■□□□□ 0.56
Cux1P53564 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.57■□□□□ 0.56
Cux1P53564 Gm45594-201ENSMUST00000211717 241 ntBASIC18.57■□□□□ 0.56
Cux1P53564 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux1P53564 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.56■□□□□ 0.56
Cux1P53564 Gm10807-201ENSMUST00000177134 795 ntBASIC18.56■□□□□ 0.56
Cux1P53564 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC18.56■□□□□ 0.56
Cux1P53564 Gm19091-201ENSMUST00000208120 978 ntBASIC18.56■□□□□ 0.56
Cux1P53564 AC136376.2-201ENSMUST00000228819 490 ntBASIC18.56■□□□□ 0.56
Cux1P53564 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Gm13347-201ENSMUST00000120298 1353 ntBASIC18.56■□□□□ 0.56
Cux1P53564 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cux1P53564 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux1P53564 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Gm15172-201ENSMUST00000118945 1046 ntBASIC18.55■□□□□ 0.56
Cux1P53564 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC18.55■□□□□ 0.56
Cux1P53564 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Gm7504-201ENSMUST00000201449 424 ntBASIC18.55■□□□□ 0.56
Cux1P53564 Gm17825-201ENSMUST00000206836 794 ntBASIC18.55■□□□□ 0.56
Cux1P53564 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC18.55■□□□□ 0.56
Cux1P53564 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cux1P53564 Gm23105-201ENSMUST00000083719 134 ntBASIC18.55■□□□□ 0.56
Cux1P53564 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
Cux1P53564 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.55■□□□□ 0.56
Cux1P53564 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux1P53564 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms