Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.12□□□□□ -0.79
Timp3P39876 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Timp3P39876 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Timp3P39876 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Timp3P39876 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Timp3P39876 Gm27023-201ENSMUST00000182372 285 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.11□□□□□ -0.79
Timp3P39876 Gm37466-201ENSMUST00000195692 652 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.11□□□□□ -0.79
Timp3P39876 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.11□□□□□ -0.79
Timp3P39876 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Timp3P39876 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Timp3P39876 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.11□□□□□ -0.79
Timp3P39876 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Timp3P39876 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.11□□□□□ -0.79
Timp3P39876 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Timp3P39876 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms