Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.79□□□□□ -0.36
H2afxP27661 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Gm9136-201ENSMUST00000193368 454 ntBASIC12.79□□□□□ -0.36
H2afxP27661 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.79□□□□□ -0.36
H2afxP27661 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.79□□□□□ -0.36
H2afxP27661 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H2afxP27661 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.79□□□□□ -0.36
H2afxP27661 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afxP27661 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afxP27661 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Gm13689-201ENSMUST00000119360 685 ntBASIC12.78□□□□□ -0.36
H2afxP27661 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H2afxP27661 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Gm9022-201ENSMUST00000182482 992 ntBASIC12.78□□□□□ -0.36
H2afxP27661 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H2afxP27661 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H2afxP27661 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.78□□□□□ -0.36
H2afxP27661 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H2afxP27661 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afxP27661 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
H2afxP27661 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
H2afxP27661 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
H2afxP27661 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afxP27661 Cog3-203ENSMUST00000227473 4197 ntBASIC12.77□□□□□ -0.36
H2afxP27661 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
H2afxP27661 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
H2afxP27661 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.77□□□□□ -0.37
H2afxP27661 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Gm18733-201ENSMUST00000173950 856 ntBASIC12.77□□□□□ -0.37
H2afxP27661 Gm22121-201ENSMUST00000175148 54 ntBASIC12.77□□□□□ -0.37
H2afxP27661 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
H2afxP27661 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.77□□□□□ -0.37
H2afxP27661 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afxP27661 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms