Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp6P0C0A3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chmp6P0C0A3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp6P0C0A3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms