Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm17376-201ENSMUST00000166016 84 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm9499-201ENSMUST00000180888 964 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm37024-201ENSMUST00000192224 868 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm38241-201ENSMUST00000192641 898 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm5950-201ENSMUST00000213337 772 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm6082-201ENSMUST00000215204 454 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm18871-201ENSMUST00000218655 745 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 AC132384.6-201ENSMUST00000218976 1206 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.75□□□□□ -0.85
Hoxd3P09027 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.75□□□□□ -0.85
Hoxd3P09027 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxd3P09027 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Hoxd3P09027 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm25214-201ENSMUST00000104573 129 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm6461-201ENSMUST00000120015 633 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm8089-201ENSMUST00000122463 968 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm27427-201ENSMUST00000185134 193 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm4857-201ENSMUST00000192718 785 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm42734-201ENSMUST00000201656 878 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm43952-201ENSMUST00000203765 751 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 AC129017.2-201ENSMUST00000226118 1284 ntBASIC9.74□□□□□ -0.85
Hoxd3P09027 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.74□□□□□ -0.85
Hoxd3P09027 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxd3P09027 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms