Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm12036-201ENSMUST00000120008 530 ntBASIC14.5□□□□□ -0.09
Col3a1P08121 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.5□□□□□ -0.09
Col3a1P08121 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.5□□□□□ -0.09
Col3a1P08121 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Gm21092-201ENSMUST00000178995 955 ntBASIC14.5□□□□□ -0.09
Col3a1P08121 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col3a1P08121 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.5□□□□□ -0.09
Col3a1P08121 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col3a1P08121 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col3a1P08121 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Gm13916-201ENSMUST00000117368 628 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Gm9463-201ENSMUST00000206707 601 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Gm45113-201ENSMUST00000207518 165 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 Gm45398-201ENSMUST00000210561 165 ntBASIC14.49□□□□□ -0.09
Col3a1P08121 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.49□□□□□ -0.09
Col3a1P08121 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col3a1P08121 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col3a1P08121 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.48□□□□□ -0.09
Col3a1P08121 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.48□□□□□ -0.09
Col3a1P08121 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.48□□□□□ -0.09
Col3a1P08121 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.48□□□□□ -0.09
Col3a1P08121 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm22920-201ENSMUST00000102175 109 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm12029-201ENSMUST00000120073 832 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Gm15566-201ENSMUST00000121130 590 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.48□□□□□ -0.09
Col3a1P08121 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Col3a1P08121 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Gm12407-201ENSMUST00000180219 324 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Gm44980-201ENSMUST00000205826 314 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col3a1P08121 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Map1b-203ENSMUST00000223725 2669 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col3a1P08121 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.48□□□□□ -0.09
Col3a1P08121 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col3a1P08121 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Col3a1P08121 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.47□□□□□ -0.09
Col3a1P08121 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.47□□□□□ -0.09
Col3a1P08121 Gm14460-201ENSMUST00000121511 639 ntBASIC14.47□□□□□ -0.09
Col3a1P08121 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.47□□□□□ -0.09
Col3a1P08121 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col3a1P08121 Gm24844-201ENSMUST00000158679 127 ntBASIC14.47□□□□□ -0.09
Col3a1P08121 Gm3150-201ENSMUST00000166418 204 ntBASIC14.47□□□□□ -0.09
Col3a1P08121 Mir6958-201ENSMUST00000184207 73 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms