Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm16202-201ENSMUST00000117532 544 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm12203-201ENSMUST00000118235 598 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm13369-201ENSMUST00000119442 987 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm12209-201ENSMUST00000120089 596 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm22331-201ENSMUST00000158066 136 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm43433-201ENSMUST00000196573 481 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm6266-201ENSMUST00000203844 806 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm7561-201ENSMUST00000211203 886 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.48□□□□□ -0.57
Tuba1bP05213 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tuba1bP05213 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm26035-201ENSMUST00000083065 308 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tuba1bP05213 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.48□□□□□ -0.57
Tuba1bP05213 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tuba1bP05213 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm13829-201ENSMUST00000119600 138 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm11425-201ENSMUST00000119608 498 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm9396-201ENSMUST00000076703 567 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm10012-201ENSMUST00000078252 192 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tuba1bP05213 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.47□□□□□ -0.57
Tuba1bP05213 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tuba1bP05213 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tuba1bP05213 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tuba1bP05213 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tuba1bP05213 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tuba1bP05213 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.46□□□□□ -0.57
Tuba1bP05213 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tuba1bP05213 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tuba1bP05213 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tuba1bP05213 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tuba1bP05213 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms