Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm32999-201ENSMUST00000192693 562 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Gm7003-201ENSMUST00000195089 312 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tcof1O08784 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.37□□□□□ -0.11
Tcof1O08784 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tcof1O08784 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm7857-201ENSMUST00000117957 358 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Gm14277-201ENSMUST00000121195 360 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 B9d1os-201ENSMUST00000137010 674 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Tcof1O08784 Gm27390-201ENSMUST00000184516 176 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Gm9230-201ENSMUST00000188228 532 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tcof1O08784 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.37□□□□□ -0.11
Tcof1O08784 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcof1O08784 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.36□□□□□ -0.11
Tcof1O08784 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcof1O08784 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcof1O08784 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Tcof1O08784 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.36□□□□□ -0.11
Tcof1O08784 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Gm37666-201ENSMUST00000194110 866 ntBASIC14.36□□□□□ -0.11
Tcof1O08784 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.36□□□□□ -0.11
Tcof1O08784 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcof1O08784 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcof1O08784 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcof1O08784 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.36□□□□□ -0.11
Tcof1O08784 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcof1O08784 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.35□□□□□ -0.11
Tcof1O08784 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcof1O08784 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.35□□□□□ -0.11
Tcof1O08784 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms