Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chd2E9PZM4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd2E9PZM4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.41■□□□□ 0.22
Chd2E9PZM4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Gm44913-201ENSMUST00000208060 2990 ntBASIC16.41■□□□□ 0.22
Chd2E9PZM4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chd2E9PZM4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.41■□□□□ 0.22
Chd2E9PZM4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd2E9PZM4 Mir432-201ENSMUST00000157230 75 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm9369-201ENSMUST00000196009 733 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 AC154589.2-201ENSMUST00000228847 251 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm5909-201ENSMUST00000119768 1281 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm25226-201ENSMUST00000158198 123 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm25830-201ENSMUST00000158923 132 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm5599-201ENSMUST00000209602 788 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chd2E9PZM4 AC142266.1-201ENSMUST00000228107 415 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd2E9PZM4 Gm14005-210ENSMUST00000225087 1413 ntBASIC16.4■□□□□ 0.22
Chd2E9PZM4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Chd2E9PZM4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chd2E9PZM4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm15197-201ENSMUST00000120526 478 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Mir7051-201ENSMUST00000184167 73 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm7238-201ENSMUST00000206467 973 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm45094-201ENSMUST00000207013 617 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 Gm6331-201ENSMUST00000217890 450 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.39■□□□□ 0.21
Chd2E9PZM4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd2E9PZM4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd2E9PZM4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd2E9PZM4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd2E9PZM4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd2E9PZM4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms