Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Mir3547-201ENSMUST00000175461 88 ntBASIC12.15□□□□□ -0.46
Srp54bE9PXC0 AU022133-201ENSMUST00000200601 873 ntBASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srp54bE9PXC0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Srp54bE9PXC0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Srp54bE9PXC0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Srp54bE9PXC0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Srp54bE9PXC0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Srp54bE9PXC0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.14□□□□□ -0.47
Srp54bE9PXC0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.14□□□□□ -0.47
Srp54bE9PXC0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Srp54bE9PXC0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm14760-201ENSMUST00000121831 999 ntBASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms