Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Gm8099-201ENSMUST00000200510 742 ntBASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Gm28043E0CXC2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.35□□□□□ -0.43
Gm28043E0CXC2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm1335-201ENSMUST00000121653 386 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm45784-201ENSMUST00000188360 142 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm10268-201ENSMUST00000085340 555 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms