Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm37287-201ENSMUST00000195449 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm37793-201ENSMUST00000195548 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 CT573086.4-201ENSMUST00000226729 342 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm24248-201ENSMUST00000157321 322 ntBASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm9192-201ENSMUST00000183221 985 ntBASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm9884-201ENSMUST00000194343 1222 ntBASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hfm1D3Z4R1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm25053-201ENSMUST00000103982 133 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm25922-201ENSMUST00000104281 130 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm24679-201ENSMUST00000158762 111 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm25053-202ENSMUST00000199731 132 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm8436-201ENSMUST00000210152 1080 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Gm5749-201ENSMUST00000210673 1090 ntBASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hfm1D3Z4R1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm11470-201ENSMUST00000118868 1475 ntBASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm8155-201ENSMUST00000216363 1612 ntBASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms